Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
ZIC3O60481 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ZIC3O60481 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.23□□□□□ -0.45
ZIC3O60481 KRT18P4-201ENST00000422599 1288 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 AC097065.1-201ENST00000425737 517 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 RN7SL128P-201ENST00000467883 305 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 RN7SL818P-201ENST00000485099 259 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 AC026410.1-201ENST00000507366 1101 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC12.23□□□□□ -0.45
ZIC3O60481 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC12.23□□□□□ -0.45
ZIC3O60481 AC141586.1-203ENST00000567242 366 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 RN7SL134P-201ENST00000579756 303 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 RN7SL725P-201ENST00000606439 259 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 AC002472.4-201ENST00000641915 272 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ZIC3O60481 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.23□□□□□ -0.45
ZIC3O60481 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ZIC3O60481 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
ZIC3O60481 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.23□□□□□ -0.45
ZIC3O60481 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.22□□□□□ -0.45
ZIC3O60481 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ZIC3O60481 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ZIC3O60481 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 CICP9-201ENST00000444451 1913 ntBASIC12.22□□□□□ -0.45
ZIC3O60481 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ZIC3O60481 AC022080.1-201ENST00000366255 781 ntBASIC12.22□□□□□ -0.45
ZIC3O60481 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.22□□□□□ -0.45
ZIC3O60481 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC12.22□□□□□ -0.45
ZIC3O60481 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.22□□□□□ -0.45
ZIC3O60481 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
ZIC3O60481 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 AC087203.1-201ENST00000532111 1181 ntBASIC12.22□□□□□ -0.45
ZIC3O60481 METTL7AP1-201ENST00000547343 496 ntBASIC12.22□□□□□ -0.45
ZIC3O60481 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 FAM187B2P-201ENST00000577135 713 ntBASIC12.22□□□□□ -0.45
ZIC3O60481 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms