Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 ANKRD19P-201ENST00000338192 862 ntBASIC10.45□□□□□ -0.74
VGLL1Q99990 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
VGLL1Q99990 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
VGLL1Q99990 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC10.45□□□□□ -0.74
VGLL1Q99990 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC10.45□□□□□ -0.74
VGLL1Q99990 HSPB1P2-201ENST00000448722 546 ntBASIC10.45□□□□□ -0.74
VGLL1Q99990 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
VGLL1Q99990 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC10.45□□□□□ -0.74
VGLL1Q99990 CD164-210ENST00000512821 964 ntTSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.45□□□□□ -0.74
VGLL1Q99990 RN7SL455P-201ENST00000580629 282 ntBASIC10.45□□□□□ -0.74
VGLL1Q99990 MIR3615-201ENST00000581999 87 ntBASIC10.45□□□□□ -0.74
VGLL1Q99990 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AL512343.1-201ENST00000605837 169 ntBASIC10.45□□□□□ -0.74
VGLL1Q99990 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
VGLL1Q99990 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.44□□□□□ -0.74
VGLL1Q99990 AC078875.1-201ENST00000431907 724 ntBASIC10.44□□□□□ -0.74
VGLL1Q99990 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 CSF2RBP1-201ENST00000447905 391 ntBASIC10.44□□□□□ -0.74
VGLL1Q99990 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC10.44□□□□□ -0.74
VGLL1Q99990 AC104989.1-201ENST00000519711 778 ntBASIC10.44□□□□□ -0.74
VGLL1Q99990 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
VGLL1Q99990 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 KRT17P8-201ENST00000540749 863 ntBASIC10.44□□□□□ -0.74
VGLL1Q99990 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.44□□□□□ -0.74
VGLL1Q99990 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.44□□□□□ -0.74
VGLL1Q99990 RAB43P1-201ENST00000561790 589 ntBASIC10.44□□□□□ -0.74
VGLL1Q99990 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.44□□□□□ -0.74
VGLL1Q99990 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC10.44□□□□□ -0.74
VGLL1Q99990 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms