Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.77□□□□□ -0.37
HPS1Q92902 TRIM36-IT1-201ENST00000503723 881 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
HPS1Q92902 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC12.77□□□□□ -0.37
HPS1Q92902 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.77□□□□□ -0.37
HPS1Q92902 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.77□□□□□ -0.37
HPS1Q92902 DUX4L47-201ENST00000566374 394 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.77□□□□□ -0.37
HPS1Q92902 AC023510.2-201ENST00000622162 746 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 AC073578.4-201ENST00000623945 514 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.77□□□□□ -0.37
HPS1Q92902 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.77□□□□□ -0.37
HPS1Q92902 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.77□□□□□ -0.37
HPS1Q92902 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 AC073862.5-201ENST00000624129 2027 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.77□□□□□ -0.37
HPS1Q92902 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 LPP-AS2-201ENST00000605573 2852 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.77□□□□□ -0.37
HPS1Q92902 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 AC009474.1-201ENST00000455096 1565 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.77□□□□□ -0.37
HPS1Q92902 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HPS1Q92902 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.76□□□□□ -0.37
HPS1Q92902 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 AL137783.1-201ENST00000623494 1896 ntBASIC12.76□□□□□ -0.37
HPS1Q92902 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 AL132642.2-201ENST00000623423 1998 ntBASIC12.76□□□□□ -0.37
HPS1Q92902 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HPS1Q92902 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.76□□□□□ -0.37
HPS1Q92902 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 GPAA1P2-201ENST00000417923 928 ntBASIC12.76□□□□□ -0.37
HPS1Q92902 BCYRN1-201ENST00000418539 200 ntBASIC12.76□□□□□ -0.37
HPS1Q92902 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC12.76□□□□□ -0.37
HPS1Q92902 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.76□□□□□ -0.37
HPS1Q92902 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HPS1Q92902 EAF2-202ENST00000451944 960 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC12.76□□□□□ -0.37
HPS1Q92902 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.76□□□□□ -0.37
HPS1Q92902 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC12.76□□□□□ -0.37
HPS1Q92902 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.76□□□□□ -0.37
HPS1Q92902 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.76□□□□□ -0.37
HPS1Q92902 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC12.76□□□□□ -0.37
HPS1Q92902 ENPP7P14-201ENST00000621765 1040 ntBASIC12.76□□□□□ -0.37
HPS1Q92902 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC12.76□□□□□ -0.37
HPS1Q92902 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.76□□□□□ -0.37
HPS1Q92902 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HPS1Q92902 AL157414.3-201ENST00000624276 1954 ntBASIC12.76□□□□□ -0.37
HPS1Q92902 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HPS1Q92902 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms