Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.34□□□□□ -0.11
SHKBP1Q8TBC3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SHKBP1Q8TBC3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AC092810.2-201ENST00000431570 362 ntBASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AC078814.4-201ENST00000546650 327 ntBASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AC040160.2-201ENST00000623816 1675 ntBASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 AL928654.5-201ENST00000624831 2501 ntBASIC14.33□□□□□ -0.12
SHKBP1Q8TBC3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 NRADDP-201ENST00000437305 691 ntBASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 KNOP1P1-201ENST00000542108 989 ntBASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 EIF5AP2-201ENST00000585668 1047 ntBASIC14.32□□□□□ -0.12
SHKBP1Q8TBC3 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms