Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.6□□□□□ -0.39
RFC3P40938 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 AC008026.2-201ENST00000495438 348 ntBASIC12.6□□□□□ -0.39
RFC3P40938 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.6□□□□□ -0.39
RFC3P40938 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.6□□□□□ -0.39
RFC3P40938 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.6□□□□□ -0.39
RFC3P40938 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 AC008972.2-201ENST00000606587 494 ntBASIC12.6□□□□□ -0.39
RFC3P40938 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
RFC3P40938 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RFC3P40938 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 AC093462.1-201ENST00000621167 1683 ntBASIC12.6□□□□□ -0.39
RFC3P40938 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
RFC3P40938 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.6□□□□□ -0.39
RFC3P40938 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
RFC3P40938 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RFC3P40938 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RFC3P40938 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.6□□□□□ -0.39
RFC3P40938 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
RFC3P40938 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RFC3P40938 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RFC3P40938 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 AGAP10P-201ENST00000454844 2418 ntBASIC12.59□□□□□ -0.39
RFC3P40938 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RFC3P40938 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.59□□□□□ -0.39
RFC3P40938 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.59□□□□□ -0.39
RFC3P40938 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.59□□□□□ -0.39
RFC3P40938 KRT18P62-201ENST00000446618 1287 ntBASIC12.59□□□□□ -0.39
RFC3P40938 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
RFC3P40938 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.59□□□□□ -0.39
RFC3P40938 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.59□□□□□ -0.39
RFC3P40938 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.59□□□□□ -0.39
RFC3P40938 KRT18P37-201ENST00000520711 1282 ntBASIC12.59□□□□□ -0.39
RFC3P40938 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 GOLGA2P7-209ENST00000560408 745 ntBASIC12.59□□□□□ -0.39
RFC3P40938 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.59□□□□□ -0.39
RFC3P40938 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.59□□□□□ -0.39
RFC3P40938 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.59□□□□□ -0.39
RFC3P40938 RN7SL556P-201ENST00000582856 298 ntBASIC12.59□□□□□ -0.39
RFC3P40938 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RFC3P40938 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RFC3P40938 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.59□□□□□ -0.39
RFC3P40938 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RFC3P40938 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms