Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AFG3L2P1-201ENST00000521792 1763 ntBASIC10.32□□□□□ -0.76
LTAP01374 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 OR2I1P-208ENST00000641137 4948 ntBASIC10.32□□□□□ -0.76
LTAP01374 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LTAP01374 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC10.32□□□□□ -0.76
LTAP01374 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 TTTY23B-201ENST00000442790 549 ntBASIC10.32□□□□□ -0.76
LTAP01374 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.32□□□□□ -0.76
LTAP01374 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC10.32□□□□□ -0.76
LTAP01374 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 RN7SL277P-201ENST00000481521 288 ntBASIC10.32□□□□□ -0.76
LTAP01374 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LTAP01374 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 RFPL4AP1-201ENST00000530883 850 ntBASIC10.32□□□□□ -0.76
LTAP01374 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 MIR4687-201ENST00000583618 80 ntBASIC10.32□□□□□ -0.76
LTAP01374 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC10.32□□□□□ -0.76
LTAP01374 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC10.32□□□□□ -0.76
LTAP01374 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 AL031587.5-201ENST00000624344 1849 ntBASIC10.32□□□□□ -0.76
LTAP01374 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LTAP01374 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
LTAP01374 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC10.32□□□□□ -0.76
LTAP01374 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 AC010336.1-201ENST00000539278 4739 ntBASIC10.32□□□□□ -0.76
LTAP01374 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LTAP01374 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC10.31□□□□□ -0.76
LTAP01374 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC10.31□□□□□ -0.76
LTAP01374 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC10.31□□□□□ -0.76
LTAP01374 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.31□□□□□ -0.76
LTAP01374 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.31□□□□□ -0.76
LTAP01374 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC10.31□□□□□ -0.76
LTAP01374 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC10.31□□□□□ -0.76
LTAP01374 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC10.31□□□□□ -0.76
LTAP01374 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.31□□□□□ -0.76
LTAP01374 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC10.31□□□□□ -0.76
LTAP01374 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
LTAP01374 BAX-205ENST00000391871 687 ntTSL 5 BASIC10.31□□□□□ -0.76
LTAP01374 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 AC006987.1-201ENST00000413610 527 ntBASIC10.31□□□□□ -0.76
LTAP01374 BX679664.3-201ENST00000414070 555 ntBASIC10.31□□□□□ -0.76
LTAP01374 AC079178.1-201ENST00000420915 656 ntBASIC10.31□□□□□ -0.76
LTAP01374 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.31□□□□□ -0.76
LTAP01374 AC005722.1-201ENST00000431878 964 ntBASIC10.31□□□□□ -0.76
LTAP01374 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 AC113935.1-201ENST00000471722 555 ntBASIC10.31□□□□□ -0.76
LTAP01374 SLC25A15P3-201ENST00000505530 290 ntBASIC10.31□□□□□ -0.76
LTAP01374 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.31□□□□□ -0.76
LTAP01374 SRP19-206ENST00000515463 660 ntTSL 3 BASIC10.31□□□□□ -0.76
LTAP01374 SCARNA21-201ENST00000517026 139 ntBASIC10.31□□□□□ -0.76
LTAP01374 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LTAP01374 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC10.31□□□□□ -0.76
LTAP01374 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms