Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 ZDHHC8P1-202ENST00000418264 1403 ntBASIC17.3■□□□□ 0.36
CHL1O00533 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.3■□□□□ 0.36
CHL1O00533 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
CHL1O00533 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHL1O00533 TPI1P3-201ENST00000335020 740 ntBASIC17.3■□□□□ 0.36
CHL1O00533 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.3■□□□□ 0.36
CHL1O00533 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 AL929302.1-201ENST00000426556 871 ntBASIC17.3■□□□□ 0.36
CHL1O00533 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC17.3■□□□□ 0.36
CHL1O00533 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
CHL1O00533 AC244197.1-201ENST00000456494 951 ntBASIC17.3■□□□□ 0.36
CHL1O00533 CXXC1P1-202ENST00000489409 1212 ntBASIC17.3■□□□□ 0.36
CHL1O00533 AC010234.1-201ENST00000494599 870 ntBASIC17.3■□□□□ 0.36
CHL1O00533 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 BCL2L12P1-201ENST00000508390 733 ntBASIC17.3■□□□□ 0.36
CHL1O00533 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.3■□□□□ 0.36
CHL1O00533 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.3■□□□□ 0.36
CHL1O00533 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC17.3■□□□□ 0.36
CHL1O00533 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC17.3■□□□□ 0.36
CHL1O00533 MIR4746-201ENST00000579802 71 ntBASIC17.3■□□□□ 0.36
CHL1O00533 BX322534.1-201ENST00000635574 241 ntBASIC17.3■□□□□ 0.36
CHL1O00533 AC215524.1-201ENST00000635696 241 ntBASIC17.3■□□□□ 0.36
CHL1O00533 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHL1O00533 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC17.3■□□□□ 0.36
CHL1O00533 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC17.3■□□□□ 0.36
CHL1O00533 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHL1O00533 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CHL1O00533 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHL1O00533 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 AC092570.1-201ENST00000414446 469 ntBASIC17.29■□□□□ 0.36
CHL1O00533 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.29■□□□□ 0.36
CHL1O00533 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.29■□□□□ 0.36
CHL1O00533 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHL1O00533 AL139008.1-201ENST00000437894 228 ntBASIC17.29■□□□□ 0.36
CHL1O00533 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC17.29■□□□□ 0.36
CHL1O00533 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.29■□□□□ 0.36
CHL1O00533 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CHL1O00533 AC005357.2-202ENST00000590507 1060 ntBASIC17.29■□□□□ 0.36
CHL1O00533 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.29■□□□□ 0.36
CHL1O00533 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC17.29■□□□□ 0.36
CHL1O00533 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHL1O00533 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHL1O00533 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 TUBB8P5-201ENST00000445286 1351 ntBASIC17.28■□□□□ 0.36
CHL1O00533 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms