Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RAE1P78406 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAE1P78406 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 GUSBP10-201ENST00000417412 665 ntBASIC12.94□□□□□ -0.34
RAE1P78406 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 AC244107.1-201ENST00000442033 332 ntBASIC12.94□□□□□ -0.34
RAE1P78406 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 RN7SL81P-201ENST00000493781 261 ntBASIC12.94□□□□□ -0.34
RAE1P78406 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.94□□□□□ -0.34
RAE1P78406 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.94□□□□□ -0.34
RAE1P78406 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 AL137779.3-201ENST00000553295 729 ntBASIC12.94□□□□□ -0.34
RAE1P78406 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 AL133499.1-201ENST00000596207 608 ntBASIC12.94□□□□□ -0.34
RAE1P78406 AC084781.1-201ENST00000613737 656 ntBASIC12.94□□□□□ -0.34
RAE1P78406 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RAE1P78406 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RAE1P78406 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.94□□□□□ -0.34
RAE1P78406 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC12.94□□□□□ -0.34
RAE1P78406 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAE1P78406 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RAE1P78406 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 GBAP1-208ENST00000566701 1546 ntBASIC12.93□□□□□ -0.34
RAE1P78406 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.93□□□□□ -0.34
RAE1P78406 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.93□□□□□ -0.34
RAE1P78406 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 RNVU1-8-201ENST00000364272 125 ntBASIC12.93□□□□□ -0.34
RAE1P78406 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 HLA-DMA-203ENST00000395305 777 ntBASIC12.93□□□□□ -0.34
RAE1P78406 AC073210.1-201ENST00000414799 232 ntBASIC12.93□□□□□ -0.34
RAE1P78406 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 AL627422.1-201ENST00000434104 580 ntBASIC12.93□□□□□ -0.34
RAE1P78406 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.93□□□□□ -0.34
RAE1P78406 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.93□□□□□ -0.34
RAE1P78406 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.93□□□□□ -0.34
RAE1P78406 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.93□□□□□ -0.34
RAE1P78406 AC234782.1-201ENST00000451950 919 ntBASIC12.93□□□□□ -0.34
RAE1P78406 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RAE1P78406 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.93□□□□□ -0.34
RAE1P78406 AC093300.1-201ENST00000510368 1201 ntBASIC12.93□□□□□ -0.34
RAE1P78406 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.93□□□□□ -0.34
RAE1P78406 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
RAE1P78406 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 MIR8071-1-201ENST00000616769 65 ntBASIC12.93□□□□□ -0.34
RAE1P78406 MIR8071-2-201ENST00000616772 65 ntBASIC12.93□□□□□ -0.34
RAE1P78406 AP001184.1-201ENST00000637936 376 ntBASIC12.93□□□□□ -0.34
RAE1P78406 AL021155.1-201ENST00000438808 2637 ntBASIC12.93□□□□□ -0.34
RAE1P78406 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
RAE1P78406 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.93□□□□□ -0.34
RAE1P78406 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAE1P78406 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 AL031432.4-201ENST00000641729 2190 ntBASIC12.93□□□□□ -0.34
RAE1P78406 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAE1P78406 AC091807.1-201ENST00000418838 1544 ntBASIC12.93□□□□□ -0.34
RAE1P78406 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RAE1P78406 LINC02228-202ENST00000641261 2489 ntBASIC12.93□□□□□ -0.34
RAE1P78406 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RAE1P78406 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAE1P78406 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms