Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 AL009178.2-201ENST00000597278 2719 ntBASIC10.05□□□□□ -0.8
APOC4P55056 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
APOC4P55056 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
APOC4P55056 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 AL109809.1-201ENST00000418979 1367 ntBASIC10.04□□□□□ -0.8
APOC4P55056 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC10.04□□□□□ -0.8
APOC4P55056 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC10.04□□□□□ -0.8
APOC4P55056 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
APOC4P55056 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
APOC4P55056 SALL4P6-201ENST00000429385 1691 ntBASIC10.04□□□□□ -0.8
APOC4P55056 U3.5-201ENST00000363448 216 ntBASIC10.04□□□□□ -0.8
APOC4P55056 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
APOC4P55056 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 SNORA50C-201ENST00000408535 133 ntBASIC10.04□□□□□ -0.8
APOC4P55056 AC108734.2-201ENST00000420887 1069 ntBASIC10.04□□□□□ -0.8
APOC4P55056 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC10.04□□□□□ -0.8
APOC4P55056 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC10.04□□□□□ -0.8
APOC4P55056 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 AC015818.1-201ENST00000451011 244 ntBASIC10.04□□□□□ -0.8
APOC4P55056 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
APOC4P55056 ALG1L3P-201ENST00000503331 765 ntBASIC10.04□□□□□ -0.8
APOC4P55056 TBC1D3P6-201ENST00000505954 962 ntBASIC10.04□□□□□ -0.8
APOC4P55056 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC10.04□□□□□ -0.8
APOC4P55056 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 FAM187B2P-201ENST00000577135 713 ntBASIC10.04□□□□□ -0.8
APOC4P55056 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
APOC4P55056 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 AC138466.4-201ENST00000623965 852 ntBASIC10.04□□□□□ -0.8
APOC4P55056 SNORA50.1-201ENST00000628590 135 ntBASIC10.04□□□□□ -0.8
APOC4P55056 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.04□□□□□ -0.8
APOC4P55056 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 MST1P2-201ENST00000457982 2291 ntBASIC10.04□□□□□ -0.8
APOC4P55056 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC10.04□□□□□ -0.8
APOC4P55056 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 RCC2P5-201ENST00000492126 1487 ntBASIC10.04□□□□□ -0.8
APOC4P55056 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.04□□□□□ -0.8
APOC4P55056 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
APOC4P55056 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 AC245140.2-201ENST00000624054 1939 ntBASIC10.03□□□□□ -0.8
APOC4P55056 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC10.03□□□□□ -0.8
APOC4P55056 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC10.03□□□□□ -0.8
APOC4P55056 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOC4P55056 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms