Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 AC114271.1-201ENST00000612689 2813 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.39□□□□□ -0.43
APOBEC1P41238 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.39□□□□□ -0.43
APOBEC1P41238 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.39□□□□□ -0.43
APOBEC1P41238 FGFR3P1-201ENST00000449999 601 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 AC079250.1-201ENST00000456046 531 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 RPL18AP3-201ENST00000462885 528 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 IGHV1-12-201ENST00000518307 205 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.39□□□□□ -0.43
APOBEC1P41238 NUDT4P2-201ENST00000578341 546 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.39□□□□□ -0.43
APOBEC1P41238 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 PI4KAP2-201ENST00000360806 2080 ntBASIC12.39□□□□□ -0.43
APOBEC1P41238 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
APOBEC1P41238 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
APOBEC1P41238 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBEC1P41238 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.38□□□□□ -0.43
APOBEC1P41238 AL354861.1-201ENST00000445213 355 ntBASIC12.38□□□□□ -0.43
APOBEC1P41238 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.38□□□□□ -0.43
APOBEC1P41238 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 AP000911.2-201ENST00000534330 502 ntBASIC12.38□□□□□ -0.43
APOBEC1P41238 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.38□□□□□ -0.43
APOBEC1P41238 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.38□□□□□ -0.43
APOBEC1P41238 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.38□□□□□ -0.43
APOBEC1P41238 MIR8071-1-201ENST00000616769 65 ntBASIC12.38□□□□□ -0.43
APOBEC1P41238 MIR8071-2-201ENST00000616772 65 ntBASIC12.38□□□□□ -0.43
APOBEC1P41238 AC242376.2-201ENST00000619355 883 ntBASIC12.38□□□□□ -0.43
APOBEC1P41238 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.38□□□□□ -0.43
APOBEC1P41238 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
APOBEC1P41238 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBEC1P41238 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBEC1P41238 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms