Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 ATF4P4-201ENST00000393544 1930 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COL15A1P39059 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 CRIP1P2-201ENST00000425396 228 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 RPE-208ENST00000436630 1128 ntTSL 2 BASIC17.01■□□□□ 0.31
COL15A1P39059 AL356000.1-201ENST00000441073 1238 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COL15A1P39059 AC104115.1-201ENST00000484005 623 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC17.01■□□□□ 0.31
COL15A1P39059 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC17.01■□□□□ 0.31
COL15A1P39059 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC17.01■□□□□ 0.31
COL15A1P39059 AP001120.3-201ENST00000585729 489 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 EMP3-204ENST00000596315 761 ntTSL 2 BASIC17.01■□□□□ 0.31
COL15A1P39059 AC092535.4-201ENST00000609548 397 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COL15A1P39059 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL15A1P39059 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL15A1P39059 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 AC011239.2-201ENST00000624820 1489 ntBASIC17■□□□□ 0.31
COL15A1P39059 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17■□□□□ 0.31
COL15A1P39059 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC17■□□□□ 0.31
COL15A1P39059 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17■□□□□ 0.31
COL15A1P39059 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC17■□□□□ 0.31
COL15A1P39059 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 GAPDHP29-201ENST00000429913 985 ntBASIC17■□□□□ 0.31
COL15A1P39059 HNRNPA1P3-201ENST00000440968 551 ntBASIC17■□□□□ 0.31
COL15A1P39059 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC17■□□□□ 0.31
COL15A1P39059 CXXC1P1-202ENST00000489409 1212 ntBASIC17■□□□□ 0.31
COL15A1P39059 HNRNPA1P4-201ENST00000509706 756 ntBASIC17■□□□□ 0.31
COL15A1P39059 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC17■□□□□ 0.31
COL15A1P39059 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
COL15A1P39059 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL15A1P39059 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL15A1P39059 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL15A1P39059 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL15A1P39059 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.99■□□□□ 0.31
COL15A1P39059 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
COL15A1P39059 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.99■□□□□ 0.31
COL15A1P39059 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 POP5-201ENST00000341039 913 ntTSL 2 BASIC16.99■□□□□ 0.31
COL15A1P39059 SNORA30.1-201ENST00000363193 129 ntBASIC16.99■□□□□ 0.31
COL15A1P39059 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 ACTG1P23-201ENST00000437653 1074 ntBASIC16.99■□□□□ 0.31
COL15A1P39059 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
COL15A1P39059 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC16.99■□□□□ 0.31
COL15A1P39059 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.99■□□□□ 0.31
COL15A1P39059 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL15A1P39059 CDC37P2-201ENST00000562287 1029 ntBASIC16.99■□□□□ 0.31
COL15A1P39059 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC16.99■□□□□ 0.31
COL15A1P39059 ACTBP9-201ENST00000587663 1099 ntBASIC16.99■□□□□ 0.31
COL15A1P39059 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.99■□□□□ 0.31
COL15A1P39059 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 AC087072.1-201ENST00000603727 421 ntBASIC16.99■□□□□ 0.31
COL15A1P39059 COG6-212ENST00000630730 186 ntTSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms