Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM3P06753 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM3P06753 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM3P06753 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.42■□□□□ 0.06
TPM3P06753 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.42■□□□□ 0.06
TPM3P06753 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.42■□□□□ 0.06
TPM3P06753 AC005962.1-201ENST00000584100 773 ntBASIC15.42■□□□□ 0.06
TPM3P06753 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 BTNL10-201ENST00000595971 695 ntBASIC15.42■□□□□ 0.06
TPM3P06753 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.42■□□□□ 0.06
TPM3P06753 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM3P06753 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TPM3P06753 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM3P06753 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TPM3P06753 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM3P06753 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM3P06753 AC092123.2-201ENST00000611189 5421 ntBASIC15.42■□□□□ 0.06
TPM3P06753 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 AP002353.1-201ENST00000528257 1599 ntBASIC15.41■□□□□ 0.06
TPM3P06753 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TPM3P06753 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TPM3P06753 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.41■□□□□ 0.06
TPM3P06753 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 OR2R1P-201ENST00000441404 914 ntBASIC15.41■□□□□ 0.06
TPM3P06753 TTTY23B-201ENST00000442790 549 ntBASIC15.41■□□□□ 0.06
TPM3P06753 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.41■□□□□ 0.06
TPM3P06753 CHCHD2P2-201ENST00000503744 321 ntBASIC15.41■□□□□ 0.06
TPM3P06753 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.41■□□□□ 0.06
TPM3P06753 AP006547.1-201ENST00000563435 692 ntBASIC15.41■□□□□ 0.06
TPM3P06753 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.41■□□□□ 0.06
TPM3P06753 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 RHOXF1P1-202ENST00000635473 501 ntBASIC15.41■□□□□ 0.06
TPM3P06753 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 LINC01815-202ENST00000641468 1409 ntBASIC15.41■□□□□ 0.06
TPM3P06753 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM3P06753 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM3P06753 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM3P06753 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms