Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.23□□□□□ -0.45
APOC1P02654 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
APOC1P02654 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
APOC1P02654 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 AL031719.1-201ENST00000623365 2587 ntBASIC12.22□□□□□ -0.45
APOC1P02654 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.22□□□□□ -0.45
APOC1P02654 RPS9P1-201ENST00000419943 583 ntBASIC12.22□□□□□ -0.45
APOC1P02654 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.22□□□□□ -0.45
APOC1P02654 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 AC005740.1-201ENST00000515639 522 ntBASIC12.22□□□□□ -0.45
APOC1P02654 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.22□□□□□ -0.45
APOC1P02654 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.22□□□□□ -0.45
APOC1P02654 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.22□□□□□ -0.45
APOC1P02654 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.22□□□□□ -0.45
APOC1P02654 RN7SL455P-201ENST00000580629 282 ntBASIC12.22□□□□□ -0.45
APOC1P02654 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
APOC1P02654 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.22□□□□□ -0.45
APOC1P02654 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 ZNF493-208ENST00000599461 1769 ntBASIC12.22□□□□□ -0.45
APOC1P02654 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 AC108024.1-201ENST00000626286 1721 ntBASIC12.22□□□□□ -0.45
APOC1P02654 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
APOC1P02654 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC1P02654 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC1P02654 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.21□□□□□ -0.45
APOC1P02654 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.21□□□□□ -0.45
APOC1P02654 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
APOC1P02654 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.21□□□□□ -0.45
APOC1P02654 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.21□□□□□ -0.45
APOC1P02654 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.21□□□□□ -0.45
APOC1P02654 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
APOC1P02654 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.21□□□□□ -0.45
APOC1P02654 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 AC007279.1-201ENST00000448547 837 ntBASIC12.21□□□□□ -0.45
APOC1P02654 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.21□□□□□ -0.45
APOC1P02654 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms