Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KDELR3O43731 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
KDELR3O43731 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 AP000244.1-201ENST00000424582 201 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 RPL29P2-202ENST00000498671 657 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.81□□□□□ -0.2
KDELR3O43731 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC13.81□□□□□ -0.2
KDELR3O43731 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.81□□□□□ -0.2
KDELR3O43731 AC011247.3-201ENST00000603297 438 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 AC073869.4-201ENST00000620841 800 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 AC126755.5-201ENST00000622756 267 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 AL451007.2-201ENST00000632004 563 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 CICP9-201ENST00000444451 1913 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
KDELR3O43731 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
KDELR3O43731 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.81□□□□□ -0.2
KDELR3O43731 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KDELR3O43731 AC005562.1-201ENST00000583030 3219 ntBASIC13.81□□□□□ -0.2
KDELR3O43731 AC002350.2-201ENST00000623894 1828 ntBASIC13.8□□□□□ -0.2
KDELR3O43731 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 MKRN5P-201ENST00000445263 1467 ntBASIC13.8□□□□□ -0.2
KDELR3O43731 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.8□□□□□ -0.2
KDELR3O43731 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KDELR3O43731 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KDELR3O43731 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KDELR3O43731 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.8□□□□□ -0.2
KDELR3O43731 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.8□□□□□ -0.2
KDELR3O43731 AC253536.4-201ENST00000440539 267 ntBASIC13.8□□□□□ -0.2
KDELR3O43731 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.8□□□□□ -0.2
KDELR3O43731 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.8□□□□□ -0.2
KDELR3O43731 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
KDELR3O43731 ALG1L6P-201ENST00000515248 758 ntBASIC13.8□□□□□ -0.2
KDELR3O43731 AC090136.2-201ENST00000517809 420 ntBASIC13.8□□□□□ -0.2
KDELR3O43731 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.8□□□□□ -0.2
KDELR3O43731 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC13.8□□□□□ -0.2
KDELR3O43731 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
KDELR3O43731 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.8□□□□□ -0.2
KDELR3O43731 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.8□□□□□ -0.2
KDELR3O43731 METTL7AP1-201ENST00000547343 496 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms