Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC112492.5-201ENST00000421897 457 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ACTG1P3-201ENST00000431775 1114 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 WASH4P-201ENST00000564273 1246 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC008494.3-201ENST00000606615 944 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC093512.1-201ENST00000617969 520 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AL033527.5-201ENST00000641382 801 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AL139424.3-202ENST00000641619 917 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 TNKS-213ENST00000522110 2900 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AC244394.1-201ENST00000435000 1665 ntBASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
RCL1Q9Y2P8 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 CHMP1AP1-201ENST00000445563 662 ntBASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms