Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 PES1P2-201ENST00000449745 1735 ntBASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 OR7E115P-201ENST00000382617 1024 ntBASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 ACTG1P19-201ENST00000418987 1116 ntBASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AC005722.1-201ENST00000431878 964 ntBASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 EEF1DP2-201ENST00000433698 843 ntBASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AL118522.1-201ENST00000611368 560 ntBASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AC138466.5-201ENST00000624002 808 ntBASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AL139424.3-202ENST00000641619 917 ntBASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIP2Q9UDT6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 PCDHB18P-202ENST00000526308 3197 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AL445209.1-201ENST00000607269 3491 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AC093462.1-201ENST00000621167 1683 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AC108734.2-201ENST00000420887 1069 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AC006529.1-201ENST00000459978 637 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AC025186.1-201ENST00000478174 870 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 RN7SL818P-201ENST00000485099 259 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 MIR5196-201ENST00000578146 115 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 RN7SL725P-201ENST00000606439 259 ntBASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLIP2Q9UDT6 LINC00431-202ENST00000636375 159 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms