Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AC007336.3-201ENST00000623886 2160 ntBASIC11.81□□□□□ -0.52
NICN1Q9BSH3 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AC067931.2-201ENST00000623655 2003 ntBASIC11.81□□□□□ -0.52
NICN1Q9BSH3 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ANKRD19P-201ENST00000338192 862 ntBASIC11.81□□□□□ -0.52
NICN1Q9BSH3 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 HSPB1P2-201ENST00000448722 546 ntBASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AC093752.3-201ENST00000567343 901 ntBASIC11.81□□□□□ -0.52
NICN1Q9BSH3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NICN1Q9BSH3 KRT8P29-201ENST00000420409 1371 ntBASIC11.8□□□□□ -0.52
NICN1Q9BSH3 AC004899.1-201ENST00000424687 1714 ntBASIC11.8□□□□□ -0.52
NICN1Q9BSH3 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 BOLA2P3-201ENST00000404566 256 ntBASIC11.8□□□□□ -0.52
NICN1Q9BSH3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NICN1Q9BSH3 RPS9P1-201ENST00000419943 583 ntBASIC11.8□□□□□ -0.52
NICN1Q9BSH3 NME2P1-201ENST00000426182 414 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms