Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 KRT8P1-201ENST00000557533 1207 ntBASIC12.98□□□□□ -0.33
TREX2Q9BQ50 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 AL356740.1-201ENST00000602192 1297 ntBASIC12.98□□□□□ -0.33
TREX2Q9BQ50 AC138894.2-201ENST00000602838 371 ntBASIC12.98□□□□□ -0.33
TREX2Q9BQ50 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 MIR6756-201ENST00000616240 63 ntBASIC12.98□□□□□ -0.33
TREX2Q9BQ50 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.98□□□□□ -0.33
TREX2Q9BQ50 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 AC104758.3-203ENST00000562938 2123 ntBASIC12.98□□□□□ -0.33
TREX2Q9BQ50 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TREX2Q9BQ50 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 AC002350.2-201ENST00000623894 1828 ntBASIC12.97□□□□□ -0.33
TREX2Q9BQ50 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 AL627231.1-201ENST00000394467 1125 ntBASIC12.97□□□□□ -0.33
TREX2Q9BQ50 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.97□□□□□ -0.33
TREX2Q9BQ50 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 AL031713.1-201ENST00000564813 661 ntBASIC12.97□□□□□ -0.33
TREX2Q9BQ50 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TREX2Q9BQ50 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms