Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 ADGRF3-201ENST00000311519 3240 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 KIAA0040-203ENST00000545251 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
HIST1H2BCP62807 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 FCRL1-201ENST00000358292 2778 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AL353611.2-201ENST00000625008 2897 ntBASIC10.21□□□□□ -0.77
HIST1H2BCP62807 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 ZNF132-201ENST00000254166 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 LRTOMT-207ENST00000435085 3194 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 GRHL3-202ENST00000350501 2119 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 GAPDHP72-202ENST00000636791 2141 ntTSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AP001993.1-201ENST00000527317 2337 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PELI1-201ENST00000358912 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 REXO1L6P-202ENST00000619970 1078 ntBASIC10.21□□□□□ -0.77
HIST1H2BCP62807 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
HIST1H2BCP62807 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 RCAN2-202ENST00000330430 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 ATG5-204ENST00000369076 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 CU633980.1-201ENST00000613894 1708 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 PABPC1P2-201ENST00000471997 1805 ntBASIC10.21□□□□□ -0.78
HIST1H2BCP62807 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 GRID1-AS1-203ENST00000630182 2100 ntTSL 2 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HIST1H2BCP62807 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HIST1H2BCP62807 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms