Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CSNK1DP48730 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1DP48730 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.65□□□□□ -0.22
CSNK1DP48730 AC005014.1-201ENST00000432006 2976 ntBASIC13.65□□□□□ -0.22
CSNK1DP48730 AL135901.1-201ENST00000451812 333 ntBASIC13.65□□□□□ -0.22
CSNK1DP48730 RN7SL128P-201ENST00000467883 305 ntBASIC13.65□□□□□ -0.22
CSNK1DP48730 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.65□□□□□ -0.22
CSNK1DP48730 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.65□□□□□ -0.22
CSNK1DP48730 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.65□□□□□ -0.22
CSNK1DP48730 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1DP48730 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.65□□□□□ -0.22
CSNK1DP48730 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC13.65□□□□□ -0.22
CSNK1DP48730 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.65□□□□□ -0.22
CSNK1DP48730 LINC00431-202ENST00000636375 159 ntBASIC13.65□□□□□ -0.22
CSNK1DP48730 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 AL672207.1-201ENST00000328462 1570 ntBASIC13.65□□□□□ -0.22
CSNK1DP48730 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CSNK1DP48730 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CSNK1DP48730 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.65□□□□□ -0.22
CSNK1DP48730 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CSNK1DP48730 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.65□□□□□ -0.23
CSNK1DP48730 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1DP48730 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CSNK1DP48730 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1DP48730 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1DP48730 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CSNK1DP48730 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CSNK1DP48730 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CSNK1DP48730 AC022080.1-201ENST00000366255 781 ntBASIC13.64□□□□□ -0.23
CSNK1DP48730 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 HNRNPA1P33-201ENST00000421426 561 ntBASIC13.64□□□□□ -0.23
CSNK1DP48730 AC092810.2-201ENST00000431570 362 ntBASIC13.64□□□□□ -0.23
CSNK1DP48730 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1DP48730 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC13.64□□□□□ -0.23
CSNK1DP48730 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CSNK1DP48730 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1DP48730 RN7SL582P-201ENST00000491078 279 ntBASIC13.64□□□□□ -0.23
CSNK1DP48730 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.64□□□□□ -0.23
CSNK1DP48730 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CSNK1DP48730 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CSNK1DP48730 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1DP48730 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1DP48730 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 SRL-202ENST00000537996 1814 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1DP48730 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CSNK1DP48730 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1DP48730 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CSNK1DP48730 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1DP48730 Z97653.2-201ENST00000623057 1418 ntBASIC13.64□□□□□ -0.23
CSNK1DP48730 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1DP48730 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1DP48730 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1DP48730 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1DP48730 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSNK1DP48730 AC005154.3-201ENST00000419639 1393 ntBASIC13.63□□□□□ -0.23
CSNK1DP48730 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1DP48730 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CSNK1DP48730 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSNK1DP48730 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms