Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR3AP46098 AL021707.6-201ENST00000609212 491 ntBASIC12.75□□□□□ -0.37
HTR3AP46098 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR3AP46098 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.75□□□□□ -0.37
HTR3AP46098 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.75□□□□□ -0.37
HTR3AP46098 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR3AP46098 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR3AP46098 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HTR3AP46098 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR3AP46098 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR3AP46098 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 AC115284.2-201ENST00000624646 2054 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 AC022497.1-201ENST00000624916 3691 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 AL133338.1-201ENST00000565695 1517 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 FP325330.2-201ENST00000624219 5630 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HTR3AP46098 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 PPP1R2P4-201ENST00000424051 595 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 CALR4P-201ENST00000431943 946 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.74□□□□□ -0.37
HTR3AP46098 SPTLC1P5-201ENST00000450718 252 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.74□□□□□ -0.37
HTR3AP46098 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.74□□□□□ -0.37
HTR3AP46098 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 AC103810.3-201ENST00000583567 96 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.74□□□□□ -0.37
HTR3AP46098 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 AC067931.2-201ENST00000623655 2003 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HTR3AP46098 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR3AP46098 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR3AP46098 MARK2P16-201ENST00000605714 1723 ntBASIC12.74□□□□□ -0.37
HTR3AP46098 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR3AP46098 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR3AP46098 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HTR3AP46098 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR3AP46098 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR3AP46098 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR3AP46098 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
HTR3AP46098 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms