Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC17.03■□□□□ 0.32
COL15A1P39059 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC17.03■□□□□ 0.32
COL15A1P39059 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL15A1P39059 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.03■□□□□ 0.32
COL15A1P39059 AC015813.5-201ENST00000624641 1514 ntBASIC17.03■□□□□ 0.32
COL15A1P39059 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC17.03■□□□□ 0.32
COL15A1P39059 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COL15A1P39059 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.03■□□□□ 0.32
COL15A1P39059 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
COL15A1P39059 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL15A1P39059 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
COL15A1P39059 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL15A1P39059 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
COL15A1P39059 AP001331.1-201ENST00000413008 1015 ntBASIC17.02■□□□□ 0.32
COL15A1P39059 RBMX2P5-201ENST00000424312 969 ntBASIC17.02■□□□□ 0.32
COL15A1P39059 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC17.02■□□□□ 0.32
COL15A1P39059 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC17.02■□□□□ 0.32
COL15A1P39059 RN7SL789P-201ENST00000478944 293 ntBASIC17.02■□□□□ 0.32
COL15A1P39059 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC17.02■□□□□ 0.32
COL15A1P39059 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC17.02■□□□□ 0.32
COL15A1P39059 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC17.02■□□□□ 0.32
COL15A1P39059 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
COL15A1P39059 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COL15A1P39059 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
COL15A1P39059 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COL15A1P39059 AC073869.1-201ENST00000415574 2762 ntBASIC17.02■□□□□ 0.32
COL15A1P39059 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL15A1P39059 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL15A1P39059 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
COL15A1P39059 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC17.02■□□□□ 0.31
COL15A1P39059 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17.02■□□□□ 0.31
COL15A1P39059 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
COL15A1P39059 AL157832.2-205ENST00000597245 1649 ntBASIC17.02■□□□□ 0.31
COL15A1P39059 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
COL15A1P39059 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL15A1P39059 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL15A1P39059 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
COL15A1P39059 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
COL15A1P39059 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL15A1P39059 PMF1-201ENST00000368273 884 ntTSL 2 BASIC17.02■□□□□ 0.31
COL15A1P39059 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL15A1P39059 OLA1P2-201ENST00000395519 1264 ntBASIC17.02■□□□□ 0.31
COL15A1P39059 AL356653.1-201ENST00000402743 360 ntBASIC17.02■□□□□ 0.31
COL15A1P39059 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC17.02■□□□□ 0.31
COL15A1P39059 DUX4L31-201ENST00000446466 1136 ntBASIC17.02■□□□□ 0.31
COL15A1P39059 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL15A1P39059 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC17.02■□□□□ 0.31
COL15A1P39059 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC17.02■□□□□ 0.31
COL15A1P39059 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC17.02■□□□□ 0.31
COL15A1P39059 AC142086.5-202ENST00000562500 217 ntBASIC17.02■□□□□ 0.31
COL15A1P39059 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC17.02■□□□□ 0.31
COL15A1P39059 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC17.02■□□□□ 0.31
COL15A1P39059 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.02■□□□□ 0.31
COL15A1P39059 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COL15A1P39059 AL365181.3-201ENST00000605886 3222 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 AC010327.5-201ENST00000586923 3061 ntBASIC17.01■□□□□ 0.31
COL15A1P39059 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL15A1P39059 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL15A1P39059 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL15A1P39059 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.01■□□□□ 0.31
COL15A1P39059 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL15A1P39059 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms