Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.81□□□□□ -0.2
APOA4P06727 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.8□□□□□ -0.2
APOA4P06727 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.8□□□□□ -0.2
APOA4P06727 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.8□□□□□ -0.2
APOA4P06727 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOA4P06727 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.8□□□□□ -0.2
APOA4P06727 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.8□□□□□ -0.2
APOA4P06727 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.8□□□□□ -0.2
APOA4P06727 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 AC242376.1-201ENST00000559033 726 ntBASIC13.8□□□□□ -0.2
APOA4P06727 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 AC011481.3-201ENST00000623895 5594 ntBASIC13.8□□□□□ -0.2
APOA4P06727 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.8□□□□□ -0.2
APOA4P06727 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.8□□□□□ -0.2
APOA4P06727 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.8□□□□□ -0.2
APOA4P06727 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 KRT8P43-201ENST00000406052 1458 ntBASIC13.8□□□□□ -0.2
APOA4P06727 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
APOA4P06727 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOA4P06727 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
APOA4P06727 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 AL583805.1-201ENST00000391389 531 ntBASIC13.79□□□□□ -0.2
APOA4P06727 AL662890.1-201ENST00000396818 632 ntBASIC13.79□□□□□ -0.2
APOA4P06727 TUBB2BP1-201ENST00000404155 871 ntBASIC13.79□□□□□ -0.2
APOA4P06727 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.79□□□□□ -0.2
APOA4P06727 AP000358.1-201ENST00000456260 156 ntBASIC13.79□□□□□ -0.2
APOA4P06727 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.79□□□□□ -0.2
APOA4P06727 AC245884.6-201ENST00000515672 1067 ntBASIC13.79□□□□□ -0.2
APOA4P06727 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.79□□□□□ -0.2
APOA4P06727 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 AC007326.1-201ENST00000604539 458 ntBASIC13.79□□□□□ -0.2
APOA4P06727 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 TEKT4P2-202ENST00000559466 1312 ntBASIC13.79□□□□□ -0.2
APOA4P06727 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms