Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.91□□□□□ -0.02
VTNP04004 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.91□□□□□ -0.02
VTNP04004 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.91□□□□□ -0.02
VTNP04004 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.91□□□□□ -0.02
VTNP04004 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.91□□□□□ -0.02
VTNP04004 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC14.91□□□□□ -0.02
VTNP04004 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.91□□□□□ -0.02
VTNP04004 IGHEP2-201ENST00000519308 1256 ntBASIC14.91□□□□□ -0.02
VTNP04004 AC012158.2-201ENST00000536546 354 ntBASIC14.91□□□□□ -0.02
VTNP04004 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.91□□□□□ -0.02
VTNP04004 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.91□□□□□ -0.02
VTNP04004 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.91□□□□□ -0.02
VTNP04004 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.91□□□□□ -0.02
VTNP04004 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.91□□□□□ -0.02
VTNP04004 AC010531.8-201ENST00000623341 685 ntBASIC14.91□□□□□ -0.02
VTNP04004 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
VTNP04004 PI4KAP2-201ENST00000360806 2080 ntBASIC14.91□□□□□ -0.02
VTNP04004 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.91□□□□□ -0.02
VTNP04004 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
VTNP04004 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.9□□□□□ -0.02
VTNP04004 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.9□□□□□ -0.02
VTNP04004 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
VTNP04004 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 ABCD1P2-201ENST00000429313 1601 ntBASIC14.9□□□□□ -0.02
VTNP04004 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
VTNP04004 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VTNP04004 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.9□□□□□ -0.02
VTNP04004 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VTNP04004 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 AC012531.1-201ENST00000562848 2680 ntBASIC14.89□□□□□ -0.03
VTNP04004 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VTNP04004 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VTNP04004 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
VTNP04004 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.89□□□□□ -0.03
VTNP04004 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VTNP04004 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms