Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
APOC1P02654 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
APOC1P02654 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 AC004898.1-201ENST00000451057 766 ntBASIC12.24□□□□□ -0.45
APOC1P02654 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 DUX4L50-201ENST00000455245 715 ntBASIC12.24□□□□□ -0.45
APOC1P02654 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 SLC25A15P3-201ENST00000505530 290 ntBASIC12.24□□□□□ -0.45
APOC1P02654 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.24□□□□□ -0.45
APOC1P02654 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.24□□□□□ -0.45
APOC1P02654 MIR4259-201ENST00000584466 101 ntBASIC12.24□□□□□ -0.45
APOC1P02654 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 AC073862.5-201ENST00000624129 2027 ntBASIC12.24□□□□□ -0.45
APOC1P02654 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
APOC1P02654 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC1P02654 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.24□□□□□ -0.45
APOC1P02654 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
APOC1P02654 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APOC1P02654 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APOC1P02654 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC1P02654 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.23□□□□□ -0.45
APOC1P02654 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 RNA5SP359-201ENST00000364838 113 ntBASIC12.23□□□□□ -0.45
APOC1P02654 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 BRWD1P1-201ENST00000401091 371 ntBASIC12.23□□□□□ -0.45
APOC1P02654 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
APOC1P02654 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.23□□□□□ -0.45
APOC1P02654 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
APOC1P02654 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.23□□□□□ -0.45
APOC1P02654 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.23□□□□□ -0.45
APOC1P02654 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.23□□□□□ -0.45
APOC1P02654 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC1P02654 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC1P02654 AL161773.1-201ENST00000624845 863 ntBASIC12.23□□□□□ -0.45
APOC1P02654 AC100757.4-201ENST00000626934 759 ntBASIC12.23□□□□□ -0.45
APOC1P02654 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC1P02654 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.23□□□□□ -0.45
APOC1P02654 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC1P02654 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC1P02654 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms