Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 RN7SL530P-201ENST00000485097 298 ntBASIC14.2□□□□□ -0.14
SCG3Q8WXD2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 SPCS2P2-201ENST00000603270 608 ntBASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AL109837.1-201ENST00000603272 613 ntBASIC14.2□□□□□ -0.14
SCG3Q8WXD2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 COX6A1P2-201ENST00000620597 330 ntBASIC14.2□□□□□ -0.14
SCG3Q8WXD2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCG3Q8WXD2 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AL022323.5-201ENST00000624101 2059 ntBASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AC015909.3-201ENST00000572855 1794 ntBASIC14.19□□□□□ -0.14
SCG3Q8WXD2 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 RPL8P2-201ENST00000430538 502 ntBASIC14.19□□□□□ -0.14
SCG3Q8WXD2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AC093752.3-201ENST00000567343 901 ntBASIC14.19□□□□□ -0.14
SCG3Q8WXD2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 LINC01165-201ENST00000445190 1623 ntBASIC14.19□□□□□ -0.14
SCG3Q8WXD2 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.19□□□□□ -0.14
SCG3Q8WXD2 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
SCG3Q8WXD2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCG3Q8WXD2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.18□□□□□ -0.14
SCG3Q8WXD2 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.18□□□□□ -0.14
SCG3Q8WXD2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.18□□□□□ -0.14
SCG3Q8WXD2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms