Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC13.04□□□□□ -0.32
CLK1P49759 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CLK1P49759 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CLK1P49759 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 AL359845.1-201ENST00000458202 1648 ntBASIC13.04□□□□□ -0.32
CLK1P49759 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 DPM3-202ENST00000368399 517 ntBASIC13.04□□□□□ -0.32
CLK1P49759 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CLK1P49759 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CLK1P49759 ACTBP11-201ENST00000436287 1126 ntBASIC13.04□□□□□ -0.32
CLK1P49759 XBP1P1-201ENST00000436573 652 ntBASIC13.04□□□□□ -0.32
CLK1P49759 RNMTL1P1-201ENST00000454103 560 ntBASIC13.04□□□□□ -0.32
CLK1P49759 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 SERPINA13P-202ENST00000478994 924 ntBASIC13.04□□□□□ -0.32
CLK1P49759 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.04□□□□□ -0.32
CLK1P49759 AC022217.1-201ENST00000521069 738 ntBASIC13.04□□□□□ -0.32
CLK1P49759 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.04□□□□□ -0.32
CLK1P49759 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 PGAM1P5-201ENST00000548011 764 ntBASIC13.04□□□□□ -0.32
CLK1P49759 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.04□□□□□ -0.32
CLK1P49759 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.04□□□□□ -0.32
CLK1P49759 AC068587.8-201ENST00000641239 219 ntBASIC13.04□□□□□ -0.32
CLK1P49759 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CLK1P49759 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 AC115284.2-201ENST00000624646 2054 ntBASIC13.04□□□□□ -0.32
CLK1P49759 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CLK1P49759 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CLK1P49759 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 FAM90A7P-201ENST00000382628 1395 ntBASIC13.04□□□□□ -0.32
CLK1P49759 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 FAM90A23P-201ENST00000400136 1395 ntBASIC13.04□□□□□ -0.32
CLK1P49759 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.04□□□□□ -0.32
CLK1P49759 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLK1P49759 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.03□□□□□ -0.32
CLK1P49759 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC13.03□□□□□ -0.32
CLK1P49759 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLK1P49759 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 CYP4F23P-201ENST00000593402 1579 ntBASIC13.03□□□□□ -0.32
CLK1P49759 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CLK1P49759 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC13.03□□□□□ -0.32
CLK1P49759 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.03□□□□□ -0.32
CLK1P49759 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 AC005740.2-201ENST00000511085 419 ntBASIC13.03□□□□□ -0.32
CLK1P49759 SCARNA21-201ENST00000517026 139 ntBASIC13.03□□□□□ -0.32
CLK1P49759 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLK1P49759 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLK1P49759 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.03□□□□□ -0.32
CLK1P49759 AL132994.2-201ENST00000603120 687 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms