Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.74□□□□□ -0.37
BMP4P12644 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BMP4P12644 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
BMP4P12644 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.74□□□□□ -0.37
BMP4P12644 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BMP4P12644 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 AL031432.4-201ENST00000641729 2190 ntBASIC12.73□□□□□ -0.37
BMP4P12644 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
BMP4P12644 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.73□□□□□ -0.37
BMP4P12644 Z97180.1-201ENST00000445173 988 ntBASIC12.73□□□□□ -0.37
BMP4P12644 AL133466.1-201ENST00000447582 150 ntBASIC12.73□□□□□ -0.37
BMP4P12644 AL035414.1-201ENST00000451327 857 ntBASIC12.73□□□□□ -0.37
BMP4P12644 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 AC100850.1-201ENST00000506768 649 ntBASIC12.73□□□□□ -0.37
BMP4P12644 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.73□□□□□ -0.37
BMP4P12644 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.73□□□□□ -0.37
BMP4P12644 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.73□□□□□ -0.37
BMP4P12644 AC138696.2-201ENST00000607376 223 ntBASIC12.73□□□□□ -0.37
BMP4P12644 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.73□□□□□ -0.37
BMP4P12644 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
BMP4P12644 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
BMP4P12644 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
BMP4P12644 FP325330.2-201ENST00000624219 5630 ntBASIC12.73□□□□□ -0.37
BMP4P12644 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.72□□□□□ -0.37
BMP4P12644 AL132642.2-201ENST00000623423 1998 ntBASIC12.72□□□□□ -0.37
BMP4P12644 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.72□□□□□ -0.37
BMP4P12644 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
BMP4P12644 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
BMP4P12644 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
BMP4P12644 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BMP4P12644 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.72□□□□□ -0.37
BMP4P12644 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC12.72□□□□□ -0.37
BMP4P12644 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
BMP4P12644 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.72□□□□□ -0.37
BMP4P12644 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms