Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 PDLIM1P1-201ENST00000604187 969 ntBASIC15.33■□□□□ 0.04
TRIM17Q9Y577 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC15.33■□□□□ 0.04
TRIM17Q9Y577 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 AC026748.1-201ENST00000624349 3251 ntBASIC15.33■□□□□ 0.04
TRIM17Q9Y577 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM17Q9Y577 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 MARCKSL1P2-201ENST00000401037 976 ntBASIC15.32■□□□□ 0.04
TRIM17Q9Y577 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 GAPDHP29-201ENST00000429913 985 ntBASIC15.32■□□□□ 0.04
TRIM17Q9Y577 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 BCAR1P1-201ENST00000553953 636 ntBASIC15.32■□□□□ 0.04
TRIM17Q9Y577 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 RAB42P1-201ENST00000555078 316 ntBASIC15.32■□□□□ 0.04
TRIM17Q9Y577 MIR6871-201ENST00000613433 56 ntBASIC15.32■□□□□ 0.04
TRIM17Q9Y577 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 AC010601.2-201ENST00000623060 774 ntBASIC15.32■□□□□ 0.04
TRIM17Q9Y577 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TRIM17Q9Y577 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 AC024475.2-201ENST00000312173 879 ntBASIC15.31■□□□□ 0.04
TRIM17Q9Y577 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 AC005077.3-201ENST00000449614 213 ntBASIC15.31■□□□□ 0.04
TRIM17Q9Y577 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 RN7SL148P-201ENST00000467120 279 ntBASIC15.31■□□□□ 0.04
TRIM17Q9Y577 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 DDX11L8-201ENST00000535849 366 ntBASIC15.31■□□□□ 0.04
TRIM17Q9Y577 GOLGA2P10-201ENST00000550961 817 ntBASIC15.31■□□□□ 0.04
TRIM17Q9Y577 PSME3-213ENST00000592169 826 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 AL589743.3-201ENST00000604121 517 ntBASIC15.31■□□□□ 0.04
TRIM17Q9Y577 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM17Q9Y577 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms