Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
POLR2J2Q9GZM3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 RNA5SP359-201ENST00000364838 113 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 TUBB2BP1-201ENST00000404155 871 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC104073.2-201ENST00000453737 312 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 RCC2P8-201ENST00000502779 1035 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC119751.2-201ENST00000504529 210 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC063926.2-201ENST00000623766 1308 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 AC022497.1-201ENST00000624916 3691 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 KRT8P21-201ENST00000430398 1491 ntBASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
POLR2J2Q9GZM3 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 COQ10BP2-201ENST00000513804 724 ntBASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 AC126915.1-201ENST00000522847 1038 ntBASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.76□□□□□ -0.37
POLR2J2Q9GZM3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms