Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH3Q96II8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH3Q96II8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH3Q96II8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH3Q96II8 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC14.84□□□□□ -0.03
LRCH3Q96II8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH3Q96II8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH3Q96II8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH3Q96II8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH3Q96II8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH3Q96II8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.83□□□□□ -0.03
LRCH3Q96II8 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH3Q96II8 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH3Q96II8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH3Q96II8 AP001267.2-201ENST00000532619 2086 ntBASIC14.83□□□□□ -0.03
LRCH3Q96II8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.83□□□□□ -0.03
LRCH3Q96II8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 MYO15B-237ENST00000642007 4893 ntBASIC14.83□□□□□ -0.04
LRCH3Q96II8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 RN7SL638P-201ENST00000494527 290 ntBASIC14.83□□□□□ -0.04
LRCH3Q96II8 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 SRPK2P-201ENST00000523408 1100 ntBASIC14.83□□□□□ -0.04
LRCH3Q96II8 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 AL049840.2-201ENST00000602722 535 ntBASIC14.83□□□□□ -0.04
LRCH3Q96II8 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.83□□□□□ -0.04
LRCH3Q96II8 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH3Q96II8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 DLX4-206ENST00000611342 1662 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 PLAC9P1-203ENST00000440031 223 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AL137077.1-201ENST00000442115 528 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC007690.1-201ENST00000451924 468 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 RN7SL148P-201ENST00000467120 279 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC104212.2-201ENST00000478813 628 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC133555.4-201ENST00000569081 152 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC022382.1-201ENST00000602768 336 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC009812.1-201ENST00000605948 1059 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC005014.3-201ENST00000605985 190 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AL121992.3-201ENST00000606186 346 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 MED25-209ENST00000612791 881 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 MIR8071-1-201ENST00000616769 65 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 MIR8071-2-201ENST00000616772 65 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 MECP2-226ENST00000640414 897 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 CASC19-229ENST00000641418 1373 ntBASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms