Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 MIR3619-201ENST00000579667 83 ntBASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AC103810.3-201ENST00000583567 96 ntBASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AC012044.1-201ENST00000603431 297 ntBASIC12.9□□□□□ -0.34
NUP43Q8NFH3 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.9□□□□□ -0.34
NUP43Q8NFH3 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AC009145.4-201ENST00000625119 1294 ntBASIC12.9□□□□□ -0.34
NUP43Q8NFH3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NUP43Q8NFH3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NUP43Q8NFH3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AL627231.1-201ENST00000394467 1125 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 RPL3P2-204ENST00000413027 1203 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 GRPEL2P1-201ENST00000453145 339 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 RN7SL574P-201ENST00000581512 297 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC007718.1-201ENST00000621078 280 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 CU633904.3-201ENST00000624042 1029 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC010970.1-201ENST00000445125 1848 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 COL6A4P2-202ENST00000504443 2753 ntBASIC12.89□□□□□ -0.35
NUP43Q8NFH3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NUP43Q8NFH3 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP43Q8NFH3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP43Q8NFH3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP43Q8NFH3 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP43Q8NFH3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP43Q8NFH3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms