Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 ACTBP9-201ENST00000587663 1099 ntBASIC20.97■□□□□ 0.95
VPS8Q8N3P4 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS8Q8N3P4 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 KRT8P30-201ENST00000432100 650 ntBASIC20.96■□□□□ 0.95
VPS8Q8N3P4 RPL3P5-201ENST00000441645 1232 ntBASIC20.96■□□□□ 0.95
VPS8Q8N3P4 RPS15P5-201ENST00000449885 432 ntBASIC20.96■□□□□ 0.95
VPS8Q8N3P4 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 AC018445.4-201ENST00000624066 2291 ntBASIC20.96■□□□□ 0.95
VPS8Q8N3P4 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 PCDHB19P-202ENST00000625133 2914 ntBASIC20.96■□□□□ 0.95
VPS8Q8N3P4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS8Q8N3P4 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
VPS8Q8N3P4 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.95
VPS8Q8N3P4 MIR1227-201ENST00000408484 88 ntBASIC20.95■□□□□ 0.95
VPS8Q8N3P4 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC20.95■□□□□ 0.95
VPS8Q8N3P4 RNU1-80P-201ENST00000459500 161 ntBASIC20.95■□□□□ 0.95
VPS8Q8N3P4 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
VPS8Q8N3P4 AC010202.1-201ENST00000551181 405 ntBASIC20.95■□□□□ 0.95
VPS8Q8N3P4 PRMT1P1-201ENST00000604252 1009 ntBASIC20.95■□□□□ 0.95
VPS8Q8N3P4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 AC244154.1-201ENST00000620148 1555 ntBASIC20.95■□□□□ 0.94
VPS8Q8N3P4 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 COQ4-202ENST00000372875 928 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 OR2T32P-201ENST00000403423 963 ntBASIC20.95■□□□□ 0.94
VPS8Q8N3P4 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 RN7SL684P-201ENST00000465665 294 ntBASIC20.95■□□□□ 0.94
VPS8Q8N3P4 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 RPL29P2-201ENST00000488409 460 ntBASIC20.95■□□□□ 0.94
VPS8Q8N3P4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS8Q8N3P4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms