Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OR7E37P-201ENST00000421076 897 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 APRT-202ENST00000426324 664 ntTSL 2 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AKIRIN1P2-201ENST00000440655 570 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 HNRNPA1P30-202ENST00000440699 997 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 VTI1BP1-201ENST00000486325 700 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 KRT18P7-201ENST00000557241 1219 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 ZNF493-208ENST00000599461 1769 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC012313.9-201ENST00000619318 633 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 FTH1P19-201ENST00000402402 528 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 OR2A15P-201ENST00000463814 900 ntBASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 UBA3-212ENST00000630585 390 ntTSL 4 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
VPS13DQ5THJ4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 EEF1GP3-201ENST00000421044 1288 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AC069181.1-201ENST00000498256 554 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 BCAR1P1-201ENST00000553953 636 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 YAP1P1-201ENST00000401504 1393 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 GDA-203ENST00000376986 1771 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ASS1P9-201ENST00000513426 1236 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 OR5BA1P-201ENST00000529722 982 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AIFM1P1-201ENST00000413342 1841 ntBASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS13DQ5THJ4 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms