Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 OR8S1-201ENST00000310194 1080 ntBASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AC092580.1-201ENST00000433998 658 ntBASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AC079316.1-201ENST00000548397 411 ntBASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AC015967.2-201ENST00000624092 234 ntBASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AC006435.4-201ENST00000625037 234 ntBASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AL356737.1-201ENST00000634391 234 ntBASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ANKRD55Q3KP44 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 AC244394.1-201ENST00000435000 1665 ntBASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 AC016694.1-201ENST00000434179 700 ntBASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 CHMP1AP1-201ENST00000445563 662 ntBASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 DUX4L46-201ENST00000566845 751 ntBASIC11.46□□□□□ -0.57
ANKRD55Q3KP44 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms