Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.29□□□□□ -0.12
CBX1P83916 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CBX1P83916 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.29□□□□□ -0.12
CBX1P83916 RARRES2P9-201ENST00000565168 469 ntBASIC14.29□□□□□ -0.12
CBX1P83916 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.29□□□□□ -0.12
CBX1P83916 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.29□□□□□ -0.12
CBX1P83916 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 AL691432.3-201ENST00000621860 400 ntBASIC14.29□□□□□ -0.12
CBX1P83916 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CBX1P83916 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 RSU1-201ENST00000345264 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC14.29□□□□□ -0.12
CBX1P83916 AL512791.2-201ENST00000615251 4609 ntBASIC14.29□□□□□ -0.12
CBX1P83916 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CBX1P83916 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC14.28□□□□□ -0.12
CBX1P83916 ZNF185-210ENST00000454925 3191 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CBX1P83916 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 MPP2-203ENST00000461854 3462 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CBX1P83916 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC14.28□□□□□ -0.12
CBX1P83916 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CBX1P83916 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 AC006144.1-201ENST00000424220 1600 ntBASIC14.28□□□□□ -0.12
CBX1P83916 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC14.28□□□□□ -0.12
CBX1P83916 KRT8P28-201ENST00000433288 1390 ntBASIC14.28□□□□□ -0.12
CBX1P83916 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 HSPA8P7-201ENST00000443628 1948 ntBASIC14.28□□□□□ -0.12
CBX1P83916 AL138799.1-201ENST00000448213 1675 ntBASIC14.28□□□□□ -0.12
CBX1P83916 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.28□□□□□ -0.12
CBX1P83916 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CBX1P83916 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.28□□□□□ -0.12
CBX1P83916 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
CBX1P83916 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 AL513190.1-201ENST00000621254 727 ntBASIC14.28□□□□□ -0.12
CBX1P83916 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 MINDY1-203ENST00000361936 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CBX1P83916 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC14.28□□□□□ -0.12
CBX1P83916 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.27□□□□□ -0.12
CBX1P83916 PPARD-203ENST00000360694 3747 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CBX1P83916 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CBX1P83916 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.27□□□□□ -0.12
CBX1P83916 LCTL-201ENST00000341509 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CBX1P83916 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CBX1P83916 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CBX1P83916 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CBX1P83916 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CBX1P83916 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CBX1P83916 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CBX1P83916 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.27□□□□□ -0.13
CBX1P83916 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.27□□□□□ -0.13
CBX1P83916 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.27□□□□□ -0.13
CBX1P83916 RN7SL589P-201ENST00000481268 310 ntBASIC14.27□□□□□ -0.13
CBX1P83916 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms