RNA–Protein interactions for RNA: ENST00000341509.9

LCTL-201, Transcript of lactase like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCTL, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCTL-201ENST00000341509 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
LCTL-201ENST00000341509 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
LCTL-201ENST00000341509 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
LCTL-201ENST00000341509 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
LCTL-201ENST00000341509 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
LCTL-201ENST00000341509 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
LCTL-201ENST00000341509 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
LCTL-201ENST00000341509 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
LCTL-201ENST00000341509 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
LCTL-201ENST00000341509 HRCP23327 699 aa19.99■□□□□ 0.79
LCTL-201ENST00000341509 PPARGC1BQ86YN6 1023 aaKnown RBP19.87■□□□□ 0.77
LCTL-201ENST00000341509 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
LCTL-201ENST00000341509 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
LCTL-201ENST00000341509 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
LCTL-201ENST00000341509 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
LCTL-201ENST00000341509 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
LCTL-201ENST00000341509 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
LCTL-201ENST00000341509 ABCC9O60706 1549 aa19.3■□□□□ 0.68
LCTL-201ENST00000341509 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.67
LCTL-201ENST00000341509 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
LCTL-201ENST00000341509 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
LCTL-201ENST00000341509 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
LCTL-201ENST00000341509 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
LCTL-201ENST00000341509 WIZO95785 1651 aa18.83■□□□□ 0.6
LCTL-201ENST00000341509 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
LCTL-201ENST00000341509 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
LCTL-201ENST00000341509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
LCTL-201ENST00000341509 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
LCTL-201ENST00000341509 NACADO15069 1562 aa18.62■□□□□ 0.57
LCTL-201ENST00000341509 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.57
LCTL-201ENST00000341509 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
LCTL-201ENST00000341509 BAZ1AQ9NRL2 1556 aaPredicted RBP18.53■□□□□ 0.56
LCTL-201ENST00000341509 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
LCTL-201ENST00000341509 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.56
LCTL-201ENST00000341509 SOGA1O94964 1423 aa18.45■□□□□ 0.54
LCTL-201ENST00000341509 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
LCTL-201ENST00000341509 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
LCTL-201ENST00000341509 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
LCTL-201ENST00000341509 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
LCTL-201ENST00000341509 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
LCTL-201ENST00000341509 SMARCA2P51531 1590 aa18.32■□□□□ 0.52
LCTL-201ENST00000341509 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
LCTL-201ENST00000341509 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
LCTL-201ENST00000341509 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
LCTL-201ENST00000341509 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
LCTL-201ENST00000341509 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
LCTL-201ENST00000341509 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
LCTL-201ENST00000341509 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
LCTL-201ENST00000341509 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
LCTL-201ENST00000341509 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.51
LCTL-201ENST00000341509 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
LCTL-201ENST00000341509 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
LCTL-201ENST00000341509 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
LCTL-201ENST00000341509 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
LCTL-201ENST00000341509 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
LCTL-201ENST00000341509 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
LCTL-201ENST00000341509 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
LCTL-201ENST00000341509 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
LCTL-201ENST00000341509 MIER1Q8N108 512 aa18.01■□□□□ 0.47
LCTL-201ENST00000341509 EEA1Q15075 1411 aa18■□□□□ 0.47
LCTL-201ENST00000341509 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
LCTL-201ENST00000341509 CLIP1P30622 1438 aa17.95■□□□□ 0.46
LCTL-201ENST00000341509 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
LCTL-201ENST00000341509 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
LCTL-201ENST00000341509 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
LCTL-201ENST00000341509 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
LCTL-201ENST00000341509 KIF21BO75037 1637 aa17.84■□□□□ 0.45
LCTL-201ENST00000341509 APLP2Q06481 763 aa17.82■□□□□ 0.44
LCTL-201ENST00000341509 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
LCTL-201ENST00000341509 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
LCTL-201ENST00000341509 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
LCTL-201ENST00000341509 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.43
LCTL-201ENST00000341509 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
LCTL-201ENST00000341509 ITGAEP38570 1179 aa17.66■□□□□ 0.42
LCTL-201ENST00000341509 ARAP1Q96P48 1450 aa17.64■□□□□ 0.41
LCTL-201ENST00000341509 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
LCTL-201ENST00000341509 PRXQ9BXM0 1461 aa17.57■□□□□ 0.4
LCTL-201ENST00000341509 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
LCTL-201ENST00000341509 CUX1P39880 1505 aa17.53■□□□□ 0.4
LCTL-201ENST00000341509 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
LCTL-201ENST00000341509 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
LCTL-201ENST00000341509 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
LCTL-201ENST00000341509 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
LCTL-201ENST00000341509 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
LCTL-201ENST00000341509 CCNB3Q8WWL7 1395 aa17.43■□□□□ 0.38
LCTL-201ENST00000341509 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
LCTL-201ENST00000341509 CLSPNQ9HAW4 1339 aa17.42■□□□□ 0.38
LCTL-201ENST00000341509 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
LCTL-201ENST00000341509 RAB3GAP2Q9H2M9 1393 aa17.38■□□□□ 0.37
LCTL-201ENST00000341509 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
LCTL-201ENST00000341509 HIRIP3Q9BW71 556 aaPredicted RBP17.37■□□□□ 0.37
LCTL-201ENST00000341509 ATP1B4Q9UN42 357 aaPredicted RBP17.33■□□□□ 0.37
LCTL-201ENST00000341509 MAPKBP1O60336 1514 aa17.33■□□□□ 0.36
LCTL-201ENST00000341509 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
LCTL-201ENST00000341509 CUX2O14529 1486 aa17.31■□□□□ 0.36
LCTL-201ENST00000341509 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
LCTL-201ENST00000341509 IGF1RP08069 1367 aa17.3■□□□□ 0.36
LCTL-201ENST00000341509 CFTRP13569 1480 aa17.3■□□□□ 0.36
LCTL-201ENST00000341509 BCANQ96GW7 911 aa17.3■□□□□ 0.36
LCTL-201ENST00000341509 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms