Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 AL355102.3-201ENST00000554299 1678 ntBASIC13.79□□□□□ -0.2
AP1S1P61966 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S1P61966 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S1P61966 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.79□□□□□ -0.2
AP1S1P61966 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S1P61966 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 MPRIPP1-201ENST00000452433 1089 ntBASIC13.79□□□□□ -0.2
AP1S1P61966 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S1P61966 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
AP1S1P61966 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.79□□□□□ -0.2
AP1S1P61966 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S1P61966 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AP1S1P61966 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 AC073862.5-201ENST00000624129 2027 ntBASIC13.79□□□□□ -0.2
AP1S1P61966 PI4KAP2-201ENST00000360806 2080 ntBASIC13.79□□□□□ -0.2
AP1S1P61966 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 AC021305.1-201ENST00000520656 1514 ntBASIC13.79□□□□□ -0.2
AP1S1P61966 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S1P61966 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S1P61966 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
AP1S1P61966 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
AP1S1P61966 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
AP1S1P61966 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP1S1P61966 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
AP1S1P61966 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S1P61966 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.78□□□□□ -0.2
AP1S1P61966 AC103563.1-201ENST00000429316 123 ntBASIC13.78□□□□□ -0.2
AP1S1P61966 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.78□□□□□ -0.2
AP1S1P61966 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.78□□□□□ -0.2
AP1S1P61966 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.78□□□□□ -0.2
AP1S1P61966 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 AC005777.1-201ENST00000588332 187 ntBASIC13.78□□□□□ -0.2
AP1S1P61966 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S1P61966 AC138466.5-201ENST00000624002 808 ntBASIC13.78□□□□□ -0.2
AP1S1P61966 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
AP1S1P61966 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S1P61966 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S1P61966 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms