Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBP50607 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBP50607 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TUBP50607 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBP50607 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBP50607 AL365181.3-201ENST00000605886 3222 ntBASIC14.54□□□□□ -0.08
TUBP50607 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TUBP50607 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBP50607 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 AC023794.5-201ENST00000564380 2157 ntBASIC14.53□□□□□ -0.08
TUBP50607 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 BAK1P1-201ENST00000317045 636 ntBASIC14.53□□□□□ -0.08
TUBP50607 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 AC073210.1-201ENST00000414799 232 ntBASIC14.53□□□□□ -0.08
TUBP50607 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.53□□□□□ -0.08
TUBP50607 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBP50607 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 AC012362.1-201ENST00000434906 739 ntBASIC14.53□□□□□ -0.08
TUBP50607 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBP50607 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBP50607 AC093300.1-201ENST00000510368 1201 ntBASIC14.53□□□□□ -0.08
TUBP50607 CTBP2P4-201ENST00000513884 920 ntBASIC14.53□□□□□ -0.08
TUBP50607 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBP50607 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 AC226150.1-201ENST00000544259 466 ntBASIC14.53□□□□□ -0.08
TUBP50607 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBP50607 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBP50607 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBP50607 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBP50607 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBP50607 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBP50607 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 AL031673.1-201ENST00000611460 466 ntBASIC14.53□□□□□ -0.08
TUBP50607 CR392039.2-201ENST00000623182 509 ntBASIC14.53□□□□□ -0.08
TUBP50607 AC002044.2-201ENST00000624910 970 ntBASIC14.53□□□□□ -0.08
TUBP50607 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TUBP50607 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TUBP50607 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBP50607 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBP50607 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TUBP50607 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBP50607 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBP50607 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.52□□□□□ -0.08
TUBP50607 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TUBP50607 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBP50607 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.52□□□□□ -0.08
TUBP50607 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TUBP50607 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.52□□□□□ -0.08
TUBP50607 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TUBP50607 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TUBP50607 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBP50607 AC106818.1-201ENST00000623223 3242 ntBASIC14.52□□□□□ -0.08
TUBP50607 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms