Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 FAM90A17P-201ENST00000533716 1957 ntBASIC15.71■□□□□ 0.11
CLCN1P35523 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN1P35523 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN1P35523 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.71■□□□□ 0.11
CLCN1P35523 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN1P35523 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN1P35523 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLCN1P35523 CICP12-201ENST00000455801 843 ntBASIC15.71■□□□□ 0.11
CLCN1P35523 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN1P35523 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN1P35523 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLCN1P35523 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLCN1P35523 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN1P35523 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLCN1P35523 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLCN1P35523 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLCN1P35523 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN1P35523 AC026797.1-201ENST00000624837 2869 ntBASIC15.71■□□□□ 0.11
CLCN1P35523 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLCN1P35523 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN1P35523 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC15.71■□□□□ 0.1
CLCN1P35523 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CLCN1P35523 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CLCN1P35523 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CLCN1P35523 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN1P35523 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CLCN1P35523 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
CLCN1P35523 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN1P35523 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN1P35523 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN1P35523 AHCYP2-201ENST00000430630 1300 ntBASIC15.7■□□□□ 0.1
CLCN1P35523 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN1P35523 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLCN1P35523 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN1P35523 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN1P35523 LINC02228-202ENST00000641261 2489 ntBASIC15.7■□□□□ 0.1
CLCN1P35523 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC15.7■□□□□ 0.1
CLCN1P35523 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.7■□□□□ 0.1
CLCN1P35523 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 AC026954.1-201ENST00000429771 1293 ntBASIC15.7■□□□□ 0.1
CLCN1P35523 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLCN1P35523 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.7■□□□□ 0.1
CLCN1P35523 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CLCN1P35523 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.7■□□□□ 0.1
CLCN1P35523 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.7■□□□□ 0.1
CLCN1P35523 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.7■□□□□ 0.1
CLCN1P35523 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.7■□□□□ 0.1
CLCN1P35523 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC15.7■□□□□ 0.1
CLCN1P35523 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN1P35523 AL358781.1-202ENST00000321081 1360 ntBASIC15.7■□□□□ 0.1
CLCN1P35523 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN1P35523 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN1P35523 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN1P35523 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLCN1P35523 AL162615.1-201ENST00000429893 1653 ntBASIC15.7■□□□□ 0.1
CLCN1P35523 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN1P35523 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN1P35523 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN1P35523 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CLCN1P35523 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLCN1P35523 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CLCN1P35523 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms