Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 PI4KAP2-201ENST00000360806 2080 ntBASIC13.84□□□□□ -0.19
APOA4P06727 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 AC008040.5-201ENST00000599781 1781 ntBASIC13.84□□□□□ -0.19
APOA4P06727 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
APOA4P06727 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
APOA4P06727 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.84□□□□□ -0.19
APOA4P06727 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.84□□□□□ -0.19
APOA4P06727 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
APOA4P06727 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 NDUFB10P1-201ENST00000567319 521 ntBASIC13.84□□□□□ -0.19
APOA4P06727 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
APOA4P06727 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.84□□□□□ -0.19
APOA4P06727 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.84□□□□□ -0.19
APOA4P06727 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 AL133338.1-201ENST00000565695 1517 ntBASIC13.84□□□□□ -0.19
APOA4P06727 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA4P06727 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA4P06727 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA4P06727 CSPG4P11-201ENST00000560634 4910 ntBASIC13.83□□□□□ -0.19
APOA4P06727 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.83□□□□□ -0.19
APOA4P06727 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOA4P06727 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
APOA4P06727 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.83□□□□□ -0.2
APOA4P06727 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.83□□□□□ -0.2
APOA4P06727 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.83□□□□□ -0.2
APOA4P06727 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 PDIA3P2-201ENST00000428073 158 ntBASIC13.83□□□□□ -0.2
APOA4P06727 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.83□□□□□ -0.2
APOA4P06727 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.83□□□□□ -0.2
APOA4P06727 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.83□□□□□ -0.2
APOA4P06727 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 MIR3619-201ENST00000579667 83 ntBASIC13.83□□□□□ -0.2
APOA4P06727 AC020922.3-201ENST00000595064 547 ntBASIC13.83□□□□□ -0.2
APOA4P06727 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 AL133467.4-201ENST00000602953 725 ntBASIC13.83□□□□□ -0.2
APOA4P06727 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.83□□□□□ -0.2
APOA4P06727 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 AC079336.7-201ENST00000623428 1078 ntBASIC13.83□□□□□ -0.2
APOA4P06727 CU633904.3-201ENST00000624042 1029 ntBASIC13.83□□□□□ -0.2
APOA4P06727 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
APOA4P06727 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
APOA4P06727 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.83□□□□□ -0.2
APOA4P06727 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms