Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 MARK2P16-201ENST00000605714 1723 ntBASIC12.28□□□□□ -0.44
APOC1P02654 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.28□□□□□ -0.44
APOC1P02654 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
APOC1P02654 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOC1P02654 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC1P02654 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
APOC1P02654 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.27□□□□□ -0.44
APOC1P02654 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
APOC1P02654 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
APOC1P02654 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.27□□□□□ -0.44
APOC1P02654 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
APOC1P02654 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
APOC1P02654 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 FMO6P-201ENST00000236166 1620 ntBASIC12.27□□□□□ -0.44
APOC1P02654 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOC1P02654 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC1P02654 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 OR8S1-201ENST00000310194 1080 ntBASIC12.27□□□□□ -0.45
APOC1P02654 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC1P02654 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
APOC1P02654 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.27□□□□□ -0.45
APOC1P02654 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 BNIP3P42-201ENST00000454982 569 ntBASIC12.27□□□□□ -0.45
APOC1P02654 PFN1P12-201ENST00000455938 534 ntBASIC12.27□□□□□ -0.45
APOC1P02654 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
APOC1P02654 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC1P02654 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
APOC1P02654 AL583810.1-201ENST00000553344 1045 ntBASIC12.27□□□□□ -0.45
APOC1P02654 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 KRT8P1-201ENST00000557533 1207 ntBASIC12.27□□□□□ -0.45
APOC1P02654 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.27□□□□□ -0.45
APOC1P02654 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.27□□□□□ -0.45
APOC1P02654 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.27□□□□□ -0.45
APOC1P02654 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 BNIP3P29-201ENST00000598302 571 ntBASIC12.27□□□□□ -0.45
APOC1P02654 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 AL022334.2-201ENST00000610000 484 ntBASIC12.27□□□□□ -0.45
APOC1P02654 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.27□□□□□ -0.45
APOC1P02654 AC091271.1-201ENST00000611877 1162 ntBASIC12.27□□□□□ -0.45
APOC1P02654 AC005695.3-201ENST00000614522 232 ntBASIC12.27□□□□□ -0.45
APOC1P02654 AC011447.5-201ENST00000616168 564 ntBASIC12.27□□□□□ -0.45
APOC1P02654 NAP1L6-202ENST00000641404 1222 ntBASIC12.27□□□□□ -0.45
APOC1P02654 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
APOC1P02654 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
APOC1P02654 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC1P02654 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC1P02654 KRT8P21-201ENST00000430398 1491 ntBASIC12.27□□□□□ -0.45
APOC1P02654 AC024075.2-201ENST00000598112 1473 ntBASIC12.27□□□□□ -0.45
APOC1P02654 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
APOC1P02654 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.27□□□□□ -0.45
APOC1P02654 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms