Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
KDELR3O43731 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 AP000354.1-201ENST00000396982 456 ntBASIC13.87□□□□□ -0.19
KDELR3O43731 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.87□□□□□ -0.19
KDELR3O43731 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.87□□□□□ -0.19
KDELR3O43731 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.87□□□□□ -0.19
KDELR3O43731 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.87□□□□□ -0.19
KDELR3O43731 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.87□□□□□ -0.19
KDELR3O43731 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC13.87□□□□□ -0.19
KDELR3O43731 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.87□□□□□ -0.19
KDELR3O43731 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.87□□□□□ -0.19
KDELR3O43731 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 TRMT112P3-201ENST00000580149 358 ntBASIC13.87□□□□□ -0.19
KDELR3O43731 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KDELR3O43731 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
KDELR3O43731 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 AC007336.3-201ENST00000623886 2160 ntBASIC13.87□□□□□ -0.19
KDELR3O43731 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KDELR3O43731 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
KDELR3O43731 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KDELR3O43731 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 AC131212.3-201ENST00000624087 4219 ntBASIC13.86□□□□□ -0.19
KDELR3O43731 EGLN3-205ENST00000547327 2849 ntBASIC13.86□□□□□ -0.19
KDELR3O43731 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 U3.5-201ENST00000363448 216 ntBASIC13.86□□□□□ -0.19
KDELR3O43731 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
KDELR3O43731 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
KDELR3O43731 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 SNORD23-201ENST00000408876 110 ntBASIC13.86□□□□□ -0.19
KDELR3O43731 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.86□□□□□ -0.19
KDELR3O43731 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.86□□□□□ -0.19
KDELR3O43731 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.86□□□□□ -0.19
KDELR3O43731 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.86□□□□□ -0.19
KDELR3O43731 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.86□□□□□ -0.19
KDELR3O43731 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KDELR3O43731 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
KDELR3O43731 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms