Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
VGLL1Q99990 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VGLL1Q99990 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VGLL1Q99990 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.52□□□□□ -0.72
VGLL1Q99990 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VGLL1Q99990 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VGLL1Q99990 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VGLL1Q99990 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VGLL1Q99990 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC10.52□□□□□ -0.72
VGLL1Q99990 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VGLL1Q99990 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC10.52□□□□□ -0.73
VGLL1Q99990 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 NDUFAB1P1-201ENST00000404262 460 ntBASIC10.52□□□□□ -0.73
VGLL1Q99990 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 COX20P2-201ENST00000452636 358 ntBASIC10.52□□□□□ -0.73
VGLL1Q99990 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 RPL18P13-201ENST00000478088 569 ntBASIC10.52□□□□□ -0.73
VGLL1Q99990 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.52□□□□□ -0.73
VGLL1Q99990 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC10.52□□□□□ -0.73
VGLL1Q99990 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.52□□□□□ -0.73
VGLL1Q99990 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC10.52□□□□□ -0.73
VGLL1Q99990 SKA2-205ENST00000580541 689 ntTSL 3 BASIC10.52□□□□□ -0.73
VGLL1Q99990 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC10.52□□□□□ -0.73
VGLL1Q99990 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.52□□□□□ -0.73
VGLL1Q99990 AL161773.1-201ENST00000624845 863 ntBASIC10.52□□□□□ -0.73
VGLL1Q99990 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.52□□□□□ -0.73
VGLL1Q99990 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.52□□□□□ -0.73
VGLL1Q99990 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VGLL1Q99990 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VGLL1Q99990 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
VGLL1Q99990 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 AL035633.1-201ENST00000406139 838 ntBASIC10.51□□□□□ -0.73
VGLL1Q99990 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC10.51□□□□□ -0.73
VGLL1Q99990 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC10.51□□□□□ -0.73
VGLL1Q99990 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC10.51□□□□□ -0.73
VGLL1Q99990 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 AC106886.1-201ENST00000568660 600 ntBASIC10.51□□□□□ -0.73
VGLL1Q99990 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10.51□□□□□ -0.73
VGLL1Q99990 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC10.51□□□□□ -0.73
VGLL1Q99990 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VGLL1Q99990 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VGLL1Q99990 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms