Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 AC089987.1-201ENST00000551654 2209 ntBASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNGAP1Q96PV0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 NHP2P1-201ENST00000335274 462 ntBASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AK2P2-201ENST00000439142 405 ntBASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC015818.1-201ENST00000451011 244 ntBASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC023906.1-201ENST00000486386 453 ntBASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 ENPP7P8-202ENST00000527856 1345 ntBASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNGAP1Q96PV0 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 OR7E155P-201ENST00000412208 1014 ntBASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 IFNWP2-201ENST00000431203 580 ntBASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 AC133141.1-201ENST00000443015 339 ntBASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 RPS18P9-201ENST00000482817 460 ntBASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNGAP1Q96PV0 MIR3940-201ENST00000579148 102 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms