Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TUBB8P8-201ENST00000458717 1058 ntBASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 AC009779.1-201ENST00000551138 283 ntBASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 DUX4L45-201ENST00000566406 1057 ntBASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 AP000346.4-201ENST00000614827 381 ntBASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 AL139424.3-202ENST00000641619 917 ntBASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 RBM22P2-201ENST00000393978 1814 ntBASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 SLC25A24P2-201ENST00000415059 510 ntBASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 TSPY25P-201ENST00000429463 745 ntBASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 MPRIPP1-201ENST00000452433 1089 ntBASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 RPL13AP20-201ENST00000459725 609 ntBASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 AC079316.1-201ENST00000548397 411 ntBASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHAMP1Q96JM3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CHAMP1Q96JM3 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CHAMP1Q96JM3 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 IL9RP3-201ENST00000442856 1674 ntBASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 AC091181.1-201ENST00000623762 2098 ntBASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CHAMP1Q96JM3 MIR663B-201ENST00000408361 115 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms