Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 PAM-203ENST00000346918 3302 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.28□□□□□ -0.12
CCDC25Q86WR0 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.28□□□□□ -0.12
CCDC25Q86WR0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AC008805.1-201ENST00000590892 364 ntBASIC14.28□□□□□ -0.12
CCDC25Q86WR0 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AC015967.2-201ENST00000624092 234 ntBASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AC006435.4-201ENST00000625037 234 ntBASIC14.28□□□□□ -0.12
CCDC25Q86WR0 AL356737.1-201ENST00000634391 234 ntBASIC14.28□□□□□ -0.12
CCDC25Q86WR0 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 EGLN3-205ENST00000547327 2849 ntBASIC14.28□□□□□ -0.12
CCDC25Q86WR0 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC25Q86WR0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CCDC25Q86WR0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 MIR3197-201ENST00000582241 73 ntBASIC14.27□□□□□ -0.13
CCDC25Q86WR0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AC025048.6-201ENST00000634326 1161 ntBASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AL139424.3-202ENST00000641619 917 ntBASIC14.27□□□□□ -0.13
CCDC25Q86WR0 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AOC4P-203ENST00000566825 2289 ntBASIC14.27□□□□□ -0.13
CCDC25Q86WR0 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC25Q86WR0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms