Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.79□□□□□ -0.36
HTR3AP46098 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 KRT17P5-201ENST00000332088 839 ntBASIC12.79□□□□□ -0.36
HTR3AP46098 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
HTR3AP46098 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 ELK2AP-201ENST00000392510 1007 ntBASIC12.79□□□□□ -0.36
HTR3AP46098 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.79□□□□□ -0.36
HTR3AP46098 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 ISCA2P1-201ENST00000425548 448 ntBASIC12.79□□□□□ -0.36
HTR3AP46098 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.79□□□□□ -0.36
HTR3AP46098 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 SLC25A15P3-201ENST00000505530 290 ntBASIC12.79□□□□□ -0.36
HTR3AP46098 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.79□□□□□ -0.36
HTR3AP46098 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.79□□□□□ -0.36
HTR3AP46098 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.79□□□□□ -0.36
HTR3AP46098 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.79□□□□□ -0.36
HTR3AP46098 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.79□□□□□ -0.36
HTR3AP46098 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HTR3AP46098 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.79□□□□□ -0.36
HTR3AP46098 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.79□□□□□ -0.36
HTR3AP46098 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.79□□□□□ -0.36
HTR3AP46098 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.79□□□□□ -0.36
HTR3AP46098 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.79□□□□□ -0.36
HTR3AP46098 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.79□□□□□ -0.36
HTR3AP46098 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HTR3AP46098 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 AC015909.3-201ENST00000572855 1794 ntBASIC12.79□□□□□ -0.36
HTR3AP46098 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HTR3AP46098 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 AL021155.1-201ENST00000438808 2637 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 AL355102.3-201ENST00000554299 1678 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 BANF1P3-201ENST00000412556 261 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.78□□□□□ -0.36
HTR3AP46098 OR8T1P-201ENST00000421347 918 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 Z97180.1-201ENST00000445173 988 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.78□□□□□ -0.36
HTR3AP46098 ZNF767P-206ENST00000513792 565 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 AC005740.1-201ENST00000515639 522 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 ALG1L13P-202ENST00000519320 584 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HTR3AP46098 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HTR3AP46098 AL161670.2-201ENST00000557650 1227 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.78□□□□□ -0.36
HTR3AP46098 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.78□□□□□ -0.36
HTR3AP46098 RN7SL774P-201ENST00000577467 290 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 RN7SL455P-201ENST00000580629 282 ntBASIC12.78□□□□□ -0.36
HTR3AP46098 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms