Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DRB4X5D2U9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DRB4X5D2U9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DRB4X5D2U9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DRB4X5D2U9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DRB4X5D2U9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DRB4X5D2U9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DRB4X5D2U9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 MIR6724-1-201ENST00000616420 92 ntBASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 MIR6724-2-201ENST00000616483 92 ntBASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 MIR6724-4-201ENST00000617390 92 ntBASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 MIR6724-3-201ENST00000622482 92 ntBASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DRB4X5D2U9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DRB4X5D2U9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 AL024507.2-201ENST00000606070 2574 ntBASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DRB4X5D2U9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRB4X5D2U9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRB4X5D2U9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms