Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LSM4Q9Y4Z0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSM4Q9Y4Z0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 KRT16P3-201ENST00000439127 1283 ntBASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM4Q9Y4Z0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM4Q9Y4Z0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 ALDH1A3-203ENST00000557963 1670 ntBASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM4Q9Y4Z0 AC021242.3-201ENST00000607598 1377 ntBASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 MIR935-201ENST00000401179 91 ntBASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM4Q9Y4Z0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 ESRRAP2-201ENST00000418437 1549 ntBASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM4Q9Y4Z0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 AC242852.2-201ENST00000615738 1807 ntBASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 AC120024.1-201ENST00000562672 995 ntBASIC17.77■□□□□ 0.44
LSM4Q9Y4Z0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM4Q9Y4Z0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.77■□□□□ 0.43
LSM4Q9Y4Z0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.77■□□□□ 0.43
LSM4Q9Y4Z0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM4Q9Y4Z0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LSM4Q9Y4Z0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM4Q9Y4Z0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM4Q9Y4Z0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms